Miyakogusa Predicted Gene
- Lj3g3v2309760.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LQZ4_SOYBN |
780 |
80.5 |
86.8 |
(tr|I1LQZ4) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G09690.2 |
558 |
57.5 |
74.1 |
| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:2972356-2974592 FORWARD LENGTH=527 |
| Medicago |
Medtr4g060900.1 |
754 |
76.5 |
83.7 |
| alpha/beta fold hydrolase | HC | chr4:22404890-22399908 | 20130731 |
| Soybean |
Glyma12g07630.1 |
781 |
80.5 |
86.8 |
|
| LJGI |
gnl|LJGI|TC63879 |
1098 |
100.0 |
100.0 |
similar to UniRef100_A7NZE5 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2309760.1 |
length: 480 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
1.9e-34 |
127-447 |
| HMMPanther |
PTHR10992 |
ALPHA/BETA |
1.9e-215 |
18-455 |
| HMMPanther |
PTHR10992:SF238HYDROLASE, |
ALPHA/BETA |
1.9e-215 |
18-455 |
| HMMPfam |
PF12697 |
Abhydrolase_6 |
5.4e-24 |
171-431 |
| Seg |
seg |
seg |
NA |
259-273 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
9e-34 |
92-430 |
- Wolf-PSORT
Lj3g3v2309760.1 chlo 4, vacu 3, cyto 2, extr 2, nucl 1.5, cysk_nucl 1.5, E.R._vacu 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2309760.1 |
|