Miyakogusa Predicted Gene

Lj3g3v2309730.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SEF4_LOTJA 390 99.5 100.0 (tr|I3SEF4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G31460.1 278 71.6 85.8 | Symbols: | Ribosomal L28 family | chr4:15259773-15260847 REVERSE LENGTH=212
Medicago Medtr1g007480.1 346 87.3 94.7 | ribosomal protein L28 | HC | chr1:390537-394034 | 20130731
Soybean Glyma11g15850.2 331 80.5 91.1  
LJGI gnl|LJGI|TC57336 1114 99.8 99.8 similar to UniRef100_A7NST7 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (72%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2309730.1 length: 190 aa.
IPR001383 Ribosomal protein L28
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HAMAP MF_00373 Ribosomal_L28 14.015 42-110
HMMPfam PF00830 Ribosomal_L28 2.9e-21 44-105
IPR026569 Ribosomal protein L28/L24
Molecular Function GO:0003735 structural constituent of ribosome    
HMMPanther PTHR13528 39S 8.8e-53 17-170
no_ID  
Gene3D G3DSA:2.30.170.40 no description 2.3e-22 43-118
superfamily SSF143800 L28p-like 7.5e-16 42-127
Wolf-PSORT
Lj3g3v2309730.1	cyto 8, nucl 3, mito 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2309730.1