Miyakogusa Predicted Gene

Lj3g3v2296570.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1M5L3_SOYBN 539 61.6 77.0 (tr|I1M5L3) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT1G52320.2 465 50.9 69.7 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 8725 Blast hits to 7476 proteins in 620 species: Archae - 10; Bacteria - 622; Metazoa - 3286; Fungi - 1319; Plants - 1442; Viruses - 221; Other Eukaryotes - 1825 (source: NCBI BLink). | chr1:19484421-19487204 FORWARD LENGTH=798

Medicago Medtr2g102050.1 530 61.1 76.7 | BZIP protein,; 48652-45869, putative | HC | chr2:43914942-43918937 | 20130731

Soybean Glyma13g43590.1 541 56.3 70.4

LJGI gnl|LJGI|GO012923 700 99.5 99.5 weakly similar to UniRef100_A7P7D2 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v2296570.2 length: 611 aa.

IPR006867 Domain of unknown function DUF632

method AccNumber shortName E-value location

HMMPfam PF04782 DUF632 5.8e-91 193-500

IPR006868 Domain of unknown function DUF630

HMMPfam PF04783 DUF630 6.9e-24 1-58

no_ID

Coil coil coiled-coil NA 162-183
560-592

HMMPanther PTHR21450 UNCHARACTERIZED 2.2e-121 192-611

Seg seg seg NA 56-72
81-88
110-127
129-140
487-497
560-580

Wolf-PSORT

Lj3g3v2296570.2 nucl 7, cyto 6

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v2296570.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1M5L3_SOYBN	539	61.6	77.0	(tr\|I1M5L3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT1G52320.2	465	50.9	69.7	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT5G25590.1); Has 8725 Blast hits to 7476 proteins in 620 species: Archae - 10; Bacteria - 622; Metazoa - 3286; Fungi - 1319; Plants - 1442; Viruses - 221; Other Eukaryotes - 1825 (source: NCBI BLink). \| chr1:19484421-19487204 FORWARD LENGTH=798
Medicago	Medtr2g102050.1	530	61.1	76.7	\| BZIP protein,; 48652-45869, putative \| HC \| chr2:43914942-43918937 \| 20130731
Soybean	Glyma13g43590.1	541	56.3	70.4
LJGI	gnl\|LJGI\|GO012923	700	99.5	99.5	weakly similar to UniRef100_A7P7D2 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)

IPR006867	Domain of unknown function DUF632
Lj3g3v2296570.2				length: 611 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF04782	DUF632	5.8e-91	193-500
IPR006868	Domain of unknown function DUF630
HMMPfam	PF04783	DUF630	6.9e-24	1-58
no_ID
Coil	coil	coiled-coil	NA	162-183 560-592
HMMPanther	PTHR21450	UNCHARACTERIZED	2.2e-121	192-611
Seg	seg	seg	NA	56-72 81-88 110-127 129-140 487-497 560-580