Miyakogusa Predicted Gene

Lj3g3v2224720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T4S8_LOTJA 200 72.7 72.7 (tr|I3T4S8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G15680.1 152 53.1 58.1 | Symbols: | Ran BP2/NZF zinc finger-like superfamily protein | chr3:5315437-5316048 FORWARD LENGTH=164
Medicago Medtr4g011190.1 174 63.3 66.0 | zinc finger (Ran-binding) family protein | HC | chr4:2646573-2643799 | 20130731
Soybean Glyma08g22470.1 186 70.0 70.0  
LJGI gnl|LJGI|GO025651 567 99.7 99.7 similar to UniRef100_A7P7R9 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2224720.1 length: 150 aa.
IPR001876 Zinc finger, RanBP2-type
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1060.10 no description 2.2e-15 3-30
53-89
109-147
HMMPfam PF00641 zf-RanBP 1.9e-09 3-28
58-85
116-145
HMMSmart SM00547 Zinc 2.2e-05 5-29
60-86
118-144
PatternScan PS01358 ZF_RANBP2_1 NA 7-26
62-83
120-141
ProfileScan PS50199 ZF_RANBP2_2 10.444 3-32
58-89
116-147
no_ID  
HMMPanther PTHR23111 ZINC 1.2e-41 1-146
Seg seg seg NA 32-56
103-118
superfamily SSF90209 Ran 1.1e-06 106-150
48-92
1-35
Wolf-PSORT
Lj3g3v2224720.1	nucl 8.5, cyto_nucl 5, mito 2, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2224720.1