Miyakogusa Predicted Gene

Lj3g3v2214670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L1T8_MEDTR 104 84.9 92.5 (tr|G7L1T8) Pseudouridylate synthase-like protein OS=Medicago truncatula GN=MTR_7g114850 PE=4 SV=1
TAIR_pep AT3G04820.1 67.8 81.1 86.5 | Symbols: | Pseudouridine synthase family protein | chr3:1321453-1325949 REVERSE LENGTH=715
Medicago Medtr7g114850.1 104 84.9 92.5 | tRNA pseudouridine synthase | HC | chr7:47405990-47418215 | 20130731
Soybean Glyma19g43270.1 95.1 80.4 86.3  
LJGI gnl|LJGI|TC70929 61.9 100.0 100.0 similar to UniRef100_O82090 Cluster: Fiber annexin; n=1; Gossypium hirsutum|Rep: Fiber annexin - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2214670.1 length: 53 aa.
IPR001656 Pseudouridine synthase, TruD
method AccNumber shortName E-value location
Biological Process GO:0001522 pseudouridine synthesis    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0009982 pseudouridine synthase activity    
HMMPfam PF01142 TruD 5.2e-09 2-41
IPR011760 Pseudouridine synthase, TruD, insertion domain
Biological Process GO:0001522 pseudouridine synthesis    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0009982 pseudouridine synthase activity    
ProfileScan PS50984 TRUD 13.695 1-53
IPR020103 Pseudouridine synthase, catalytic domain
Biological Process GO:0001522 pseudouridine synthesis    
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0009451 RNA modification    
Molecular Function GO:0009982 pseudouridine synthase activity    
superfamily SSF55120 Pseudouridine 1.1e-08 1-41
Wolf-PSORT
Lj3g3v2214670.1	chlo 8, nucl 3, mito 1, vacu 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2214670.1