Miyakogusa Predicted Gene
- Lj3g3v2210360.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S581_LOTJA |
298 |
100.0 |
100.0 |
(tr|I3S581) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G15370.1 |
269 |
87.0 |
96.6 |
| Symbols: | SNARE-like superfamily protein | chr1:5287135-5288375 FORWARD LENGTH=147 |
| Medicago |
Medtr2g103690.1 |
288 |
95.2 |
97.3 |
| clathrin adaptor complex small chain | HC | chr2:44644661-44640039 | 20130731 |
| Soybean |
Glyma08g22580.1 |
291 |
95.9 |
99.3 |
|
| LJGI |
gnl|LJGI|TC59218 |
880 |
100.0 |
100.0 |
homologue to UniRef100_Q2HUA7 Cluster: Longin-like; n=1; Medicago truncatula|Rep: Longin-like - Medicago truncatula (Barrel medic), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2210360.1 |
length: 147 aa. |
| IPR011012 |
Longin-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006810 |
transport |
|
|
| superfamily |
SSF64356 |
SNARE-like |
3.5e-19 |
1-146 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.450.60 |
no description |
3e-10 |
1-139 |
| HMMPanther |
PTHR11043 |
ZETA-COAT |
4.1e-31 |
43-144 |
- Wolf-PSORT
Lj3g3v2210360.1 cyto 10, nucl 1, extr 1, cysk 1, golg 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2210360.1 |
|