Miyakogusa Predicted Gene
- Lj3g3v2187050.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L7X8_SOYBN |
251 |
86.6 |
88.7 |
(tr|K7L7X8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G80100.1 |
190 |
70.4 |
81.7 |
| Symbols: AHP6, HP6 | histidine phosphotransfer protein 6 | chr1:30133818-30134652 FORWARD LENGTH=154 |
| Medicago |
Medtr2g103870.1 |
244 |
80.8 |
87.7 |
| histidine phosphotransfer protein | HC | chr2:44734362-44732919 | 20130731 |
| Soybean |
Glyma08g22720.1 |
251 |
86.6 |
88.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2187050.1 |
length: 146 aa. |
| IPR008207 |
Signal transduction histidine kinase, phosphotransfer (Hpt) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0000160 |
phosphorelay signal transduction system |
|
|
| Molecular Function |
GO:0004871 |
signal transducer activity |
|
|
| Gene3D |
G3DSA:1.20.120.160 |
no description |
1.9e-11 |
10-127 |
| HMMPfam |
PF01627 |
Hpt |
1.1e-08 |
35-115 |
| ProfileScan |
PS50894 |
HPT |
10.137 |
29-125 |
| superfamily |
SSF47226 |
Histidine-containing |
2.2e-22 |
1-130 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
14-27 |
- Wolf-PSORT
Lj3g3v2187050.1 chlo 8, mito 3, nucl 1, cyto 1, vacu 1, cyto_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2187050.1 |
Not targeted |
-30.424 |
-1.624 |
-1.694 |
31.42% |
-27.106
|