Miyakogusa Predicted Gene

Lj3g3v2172690.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JGV2_MEDTR 540 74.2 80.0 (tr|G7JGV2) F-box/LRR-repeat protein OS=Medicago truncatula GN=MTR_4g009870 PE=4 SV=1
TAIR_pep AT1G15740.1 411 63.3 72.7 | Symbols: | Leucine-rich repeat family protein | chr1:5411509-5414544 FORWARD LENGTH=585
Medicago Medtr4g009870.1 540 74.2 80.0 | F-box/LRR-like protein | HC | chr4:2101636-2094148 | 20130731
Soybean Glyma07g03200.1 538 76.0 79.4  
LJGI gnl|LJGI|TC67305 731 100.0 100.0 similar to UniRef100_Q9LMR0 Cluster: F7H2.8 protein; n=1; Arabidopsis thaliana|Rep: F7H2.8 protein - Arabidopsis thaliana (Mouse-ear cress), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2172690.2 length: 380 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 3.6e+02 31-56
104-128
152-176
224-248
296-321
345-369
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 1.7e-06 129-167
no_ID  
Gene3D G3DSA:3.80.10.10 no description 8.6e-38 2-155
156-374
HMMPanther PTHR23125 F-BOX/LEUCINE 1.3e-123 1-335
HMMPanther PTHR23125:SF154SUBFAMILY NOT 1.3e-123 1-335
HMMPfam PF13516 LRR_6 1.1 104-123
200-219
224-245
Seg seg seg NA 77-88
190-204
216-230
241-256
superfamily SSF52047 RNI-like 6.4e-39 128-369
superfamily SSF52058 L 2.5e-27 1-168
Wolf-PSORT
Lj3g3v2172690.2	cyto 6, chlo 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2172690.2