Miyakogusa Predicted Gene

Lj3g3v2172640.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KVH4_SOYBN 1035 85.6 88.5 (tr|I1KVH4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G80490.2 900 73.6 82.7 | Symbols: TPR1 | TOPLESS-related 1 | chr1:30261094-30266446 REVERSE LENGTH=1120
Medicago Medtr2g104140.4 996 82.3 86.3 | topless-like protein | HC | chr2:44879055-44871294 | 20130731
Soybean Glyma08g22910.3 1035 85.6 88.5  
LJGI gnl|LJGI|AV407693 850 100.0 100.0 similar to UniRef100_A7QQ63 Cluster: Chromosome undetermined scaffold_141, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_141, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2172640.2 length: 590 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.00052 206-240
247-283
HMMSmart SM00320 WD40 1.1 93-132
149-193
199-240
243-284
287-330
333-373
ProfileScan PS50082 WD_REPEATS_2 9.071 206-249
351-382
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.6e-41 89-415
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 18.616 161-426
superfamily SSF50978 WD40 8.7e-42 103-417
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 227-241
no_ID  
HMMPanther PTHR22847 WD40 2.6e-153 96-590
HMMPanther PTHR22847:SF106SUBFAMILY NOT 2.6e-153 96-590
Seg seg seg NA 13-27
72-88
451-468
Wolf-PSORT
Lj3g3v2172640.2	chlo 10, pero 2, plas 1, vacu 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2172640.2