Miyakogusa Predicted Gene

Lj3g3v2171540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T7N7_MEDTR 267 76.4 84.8 (tr|I3T7N7) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT1G80620.1 226 79.7 89.8 | Symbols: | S15/NS1, RNA-binding protein | chr1:30305404-30307182 FORWARD LENGTH=414
Medicago Medtr4g009100.1 271 77.0 85.4 | 30S ribosomal protein S15 | HC | chr4:1769902-1764449 | 20130731
Soybean Glyma07g03000.1 240 74.3 88.2  
LJGI gnl|LJGI|TC60586 1170 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2171540.1 length: 199 aa.
IPR000589 Ribosomal protein S15
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF00312 Ribosomal_S15 4.6e-18 83-159
IPR005290 Ribosomal protein S15, bacterial-type
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMTigr TIGR00952 S15_bact: 2.3e-24 82-159
IPR009068 S15/NS1, RNA-binding
Gene3D G3DSA:1.10.287.10 no description 3.7e-27 80-160
superfamily SSF47060 S15/NS1 5.4e-23 75-160
no_ID  
BlastProDom PD157043 Q9M8M9_ARATH_Q9M8M9; 2e-34 83-159
Coil coil coiled-coil NA 74-95
HMMPanther PTHR23321 RIBOSOMAL 7.9e-86 1-176
HMMPanther PTHR23321:SF9 UNCHARACTERIZED 7.9e-86 1-176
Seg seg seg NA 182-196
Wolf-PSORT
Lj3g3v2171540.1	nucl 10, cyto 1, mito 1, extr 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2171540.1