Miyakogusa Predicted Gene
- Lj3g3v2128240.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KGT7_SOYBN |
579 |
82.5 |
90.4 |
(tr|I1KGT7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G15950.1 |
478 |
72.4 |
85.4 |
| Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344 |
| Medicago |
Medtr4g006940.1 |
537 |
80.9 |
90.9 |
| cinnamoyl-CoA reductase-like protein | HC | chr4:862910-866914 | 20130731 |
| Soybean |
Glyma07g02690.1 |
579 |
82.5 |
90.4 |
|
| LJGI |
gnl|LJGI|TC79666 |
969 |
88.5 |
88.5 |
similar to UniRef100_Q08GL0 Cluster: Cinnamoyl CoA reductase; n=1; Leucaena leucocephala|Rep: Cinnamoyl CoA reductase - Leucaena glauca (White popinac) (Leucaena leucocephala), partial (95%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2128240.1 |
length: 339 aa. |
| IPR001509 |
NAD-dependent epimerase/dehydratase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0044237 |
cellular metabolic process |
|
|
| Molecular Function |
GO:0050662 |
coenzyme binding |
|
|
| HMMPfam |
PF01370 |
Epimerase |
4e-28 |
15-251 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
8.8e-65 |
14-315 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
54-75 |
| HMMPanther |
PTHR10366 |
NAD |
5.1e-160 |
8-334 |
| HMMPanther |
PTHR10366:SF9 |
CINNAMOYL-COA |
5.1e-160 |
8-334 |
| superfamily |
SSF51735 |
NAD(P)-binding |
5.4e-69 |
2-320 |
- Wolf-PSORT
Lj3g3v2128240.1 chlo 6, E.R. 3, chlo_mito 3, vacu 2, E.R._plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2128240.1 |
|