Miyakogusa Predicted Gene

Lj3g3v2055450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T3P4_LOTJA 340 86.0 86.5 (tr|I3T3P4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G13580.1 293 74.1 80.7 | Symbols: | Ribosomal protein L30/L7 family protein | chr3:4433809-4435109 FORWARD LENGTH=244
Medicago Medtr4g008160.1 301 73.5 82.5 | thaliana 60S ribosomal protein L7 | HC | chr4:1428326-1425811 | 20130731
Soybean Glyma08g23750.2 323 80.5 84.5  
LJGI gnl|LJGI|TC58419 1189 100.0 100.0 homologue to UniRef100_A7QUB3 Cluster: Chromosome chr11 scaffold_177, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_177, whole genome shotgun sequence - Vitis vinifera (Grape), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2055450.1 length: 200 aa.
IPR005998 Ribosomal protein L7, eukaryotic
method AccNumber shortName E-value location
HMMTigr TIGR01310 L7: 4.7e-80 10-200
IPR012988 Ribosomal protein L30, N-terminal
HMMPfam PF08079 Ribosomal_L30_N 6.3e-24 12-82
IPR016082 Ribosomal protein L30, ferredoxin-like fold domain
Gene3D G3DSA:3.30.1390.20 no description 7.1e-20 85-160
HMMPfam PF00327 Ribosomal_L30 3.9e-21 84-135
superfamily SSF55129 Ribosomal 1e-39 84-200
IPR018038 Ribosomal protein L30, conserved site
PatternScan PS00634 RIBOSOMAL_L30 NA 103-135
no_ID  
Coil coil coiled-coil NA 49-74
HMMPanther PTHR11524 60S 2.4e-117 9-200
Seg seg seg NA 24-40
103-112
Wolf-PSORT
Lj3g3v2055450.1	cyto 11, chlo 1, nucl 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2055450.1