Miyakogusa Predicted Gene

Lj3g3v2040180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JVJ8_MEDTR 836 78.3 87.8 (tr|G7JVJ8) Mandelonitrile lyase OS=Medicago truncatula GN=MTR_4g005860 PE=3 SV=1
TAIR_pep AT1G73050.1 727 67.7 81.3 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase family protein | chr1:27476565-27478534 REVERSE LENGTH=552
Medicago Medtr4g005860.1 836 78.3 87.8 | glucose-methanol-choline (GMC) oxidoreductase family protein | HC | chr4:402062-405394 | 20130731
Soybean Glyma07g00530.1 776 76.0 85.2  
LJGI gnl|LJGI|DC595672 163 91.0 91.0 homologue to UniRef100_A7PC60 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2040180.1 length: 559 aa.
IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00732 GMC_oxred_N 4.4e-31 59-334
PatternScan PS00623 GMC_OXRED_1 NA 134-157
PatternScan PS00624 GMC_OXRED_2 NA 294-308
IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF05199 GMC_oxred_C 2.4e-30 404-545
IPR012132 Glucose-methanol-choline oxidoreductase
Biological Process GO:0006066 alcohol metabolic process    
Molecular Function GO:0008812 choline dehydrogenase activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF000137 Alcohol 1.1e-82 10-559
no_ID  
Gene3D G3DSA:3.50.50.60 no description 9.2e-88 495-556
HMMPanther PTHR11552 GLUCOSE-METHANOL-CHOLINE 4.2e-199 12-559
HMMPanther PTHR11552:SF14 SUBFAMILY 4.2e-199 12-559
Seg seg seg NA 24-39
77-86
superfamily SSF51905 FAD/NAD(P)-binding 2.1e-49 55-559
superfamily SSF54373 FAD-linked 6e-38 330-501
Wolf-PSORT
Lj3g3v2040180.1	E.R. 6, plas 2, vacu 2, chlo 1, nucl 1, cyto 1, mito 1, cyto_nucl 1, chlo_mito 1, golg_plas 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2040180.1