Miyakogusa Predicted Gene
- Lj3g3v2039890.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9RHV1_RICCO |
608 |
85.0 |
91.5 |
(tr|B9RHV1) 7-dehydrocholesterol reductase, putative OS=Ricinus communis GN=RCOM_1573850 PE=4 SV=1 |
| TAIR_pep |
AT1G50430.1 |
585 |
83.3 |
89.9 |
| Symbols: DWF5, PA, LE, ST7R, 7RED | Ergosterol biosynthesis ERG4/ERG24 family | chr1:18682175-18685555 REVERSE LENGTH=432 |
| Medicago |
Medtr4g094512.3 |
525 |
85.0 |
91.7 |
| 7-dehydrocholesterol reductase-like protein | HC | chr4:38115312-38122132 | 20130731 |
| Soybean |
Glyma08g23970.2 |
601 |
87.3 |
92.5 |
|
| LJGI |
gnl|LJGI|TC58297 |
2028 |
100.0 |
100.0 |
similar to UniRef100_A7Q4B9 Cluster: Chromosome chr9 scaffold_49, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_49, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2039890.1 |
length: 341 aa. |
| IPR001171 |
Ergosterol biosynthesis ERG4/ERG24 |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF01222 |
ERG4_ERG24 |
7.5e-51 |
46-327 |
| IPR018083 |
Sterol reductase, conserved site |
| Molecular Function |
GO:0016628 |
oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| PatternScan |
PS01017 |
STEROL_REDUCT_1 |
NA |
176-191 |
| no_ID |
|
| HMMPanther |
PTHR21257 |
STEROL |
6.4e-253 |
8-341 |
| HMMPanther |
PTHR21257:SF22 |
SUBFAMILY |
6.4e-253 |
8-341 |
- Wolf-PSORT
Lj3g3v2039890.1 plas 4, extr 3, E.R._plas 3, vacu 2, E.R. 2, nucl_plas 2, E.R._vacu 2, cysk_plas 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2039890.1 |
|