Miyakogusa Predicted Gene
- Lj3g3v2027320.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JUF1_MEDTR |
200 |
85.0 |
89.7 |
(tr|G7JUF1) Protein STRUBBELIG-RECEPTOR FAMILY OS=Medicago truncatula GN=MTR_4g005130 PE=4 SV=1 |
| TAIR_pep |
AT1G78980.1 |
166 |
72.0 |
84.1 |
| Symbols: SRF5 | STRUBBELIG-receptor family 5 | chr1:29707923-29711266 REVERSE LENGTH=699 |
| Medicago |
Medtr4g005130.1 |
200 |
85.0 |
89.7 |
| strubbelig-receptor family 6 protein | HC | chr4:79282-73272 | 20130731 |
| Soybean |
Glyma08g24170.1 |
181 |
87.5 |
92.7 |
|
| LJGI |
gnl|LJGI|TC64481 |
52.0 |
81.6 |
81.6 |
homologue to UniRef100_A7P697 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2027320.1 |
length: 107 aa. |
| IPR011009 |
Protein kinase-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
| superfamily |
SSF56112 |
Protein |
1.7e-08 |
1-79 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.510.10 |
no description |
8.4e-07 |
1-81 |
| HMMPanther |
PTHR24420 |
FAMILY |
2e-59 |
1-107 |
| HMMPanther |
PTHR24420:SF440SUBFAMILY |
NOT |
2e-59 |
1-107 |
- Wolf-PSORT
Lj3g3v2027320.1 chlo 10, cyto 2, nucl 1, vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2027320.1 |
|