Miyakogusa Predicted Gene
- Lj3g3v1982350.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MT44_SOYBN |
1243 |
90.8 |
96.7 |
(tr|K7MT44) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G60560.1 |
1081 |
76.4 |
90.6 |
| Symbols: | SWIM zinc finger family protein | chr1:22308791-22311277 REVERSE LENGTH=703 |
| Medicago |
Medtr8g043760.1 |
1215 |
89.2 |
95.0 |
| SWIM zinc finger protein | HC | chr8:16714333-16720217 | 20130731 |
| Soybean |
Glyma18g39890.1 |
1243 |
90.8 |
96.7 |
|
| LJGI |
gnl|LJGI|TC69278 |
989 |
100.0 |
100.0 |
similar to UniRef100_O22697 Cluster: F8A5.10 protein; n=1; Arabidopsis thaliana|Rep: F8A5.10 protein - Arabidopsis thaliana (Mouse-ear cress), partial (25%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1982350.1 |
length: 647 aa. |
| IPR007527 |
Zinc finger, SWIM-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| ProfileScan |
PS50966 |
ZF_SWIM |
8.333 |
569-606 |
- Wolf-PSORT
Lj3g3v1982350.1 nucl 9, cyto 2, chlo 1, vacu 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1982350.1 |
|