Miyakogusa Predicted Gene

Lj3g3v1981280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JZF3_SOYBN 820 76.4 85.8 (tr|I1JZF3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G33980.1 389 46.5 60.3 | Symbols: ATUPF3, UPF3 | Smg-4/UPF3 family protein | chr1:12351719-12354401 FORWARD LENGTH=482
Medicago Medtr3g005510.1 771 74.8 82.9 | regulator of nonsense transcripts UPF3 protein | HC | chr3:238569-230542 | 20130731
Soybean Glyma04g43630.3 820 76.4 85.8  
LJGI gnl|LJGI|TC61736 1455 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1981280.1 length: 535 aa.
IPR005120 Regulator of nonsense-mediated decay, UPF3
method AccNumber shortName E-value location
HMMPfam PF03467 Smg4_UPF3 3.8e-53 5-170
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 5.4e-33 9-101
no_ID  
HMMPanther PTHR13112 UPF3 6.5e-56 2-533
Seg seg seg NA 271-281
superfamily SSF54928 RNA-binding 1.8e-26 9-101
Wolf-PSORT
Lj3g3v1981280.1	nucl 12, chlo 1, plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1981280.1