Miyakogusa Predicted Gene

Lj3g3v1981270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q533R8_LOTJA 407 93.7 93.7 (tr|Q533R8) MADS box protein AGL11 OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G09960.1 315 70.4 80.0 | Symbols: STK, AGL11 | K-box region and MADS-box transcription factor family protein | chr4:6236713-6239409 REVERSE LENGTH=230
Medicago Medtr3g005530.1 379 87.9 90.1 | MADS-box transcription factor | HC | chr3:250434-244289 | 20130731
Soybean Glyma06g48270.3 395 89.7 90.1  
LJGI gnl|LJGI|TC57459 928 100.0 100.0 UniRef100_Q533R8 Cluster: MADS box protein AGL11; n=1; Lotus japonicus|Rep: MADS box protein AGL11 - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1981270.1 length: 209 aa.
IPR002100 Transcription factor, MADS-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
FPrintScan PR00404 MADSDOMAIN 4.4e-33 3-23
23-38
38-59
HMMPfam PF00319 SRF-TF 2.2e-29 9-59
HMMSmart SM00432 no description 1.3e-42 1-60
PatternScan PS00350 MADS_BOX_1 NA 3-57
ProfileScan PS50066 MADS_BOX_2 34.118 1-61
superfamily SSF55455 SRF-like 1.8e-32 2-94
IPR002487 Transcription factor, K-box
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 3.1e-28 76-165
ProfileScan PS51297 K_BOX 14.006 87-180
no_ID  
Coil coil coiled-coil NA 87-108
124-145
HMMPanther PTHR11945 MADS 2e-82 1-200
HMMPanther PTHR11945:SF19 MADS 2e-82 1-200
Wolf-PSORT
Lj3g3v1981270.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1981270.1