Miyakogusa Predicted Gene

Lj3g3v1981160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JZD6_SOYBN 157 90.7 90.7 (tr|I1JZD6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G36690.4 149 86.0 89.5 | Symbols: ATU2AF65A | U2 snRNP auxilliary factor, large subunit, splicing factor | chr4:17294139-17297609 REVERSE LENGTH=551
Medicago Medtr4g031680.1 157 90.7 90.7 | U2 snRNP auxilliary factor, large subunit, splicing factor | HC | chr4:10777189-10770195 | 20130731
Soybean Glyma06g48230.2 158 90.7 90.7  
LJGI gnl|LJGI|TC76613 674 100.0 100.0 similar to UniRef100_A7PUY1 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1981160.1 length: 114 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 5.5e-08 36-114
ProfileScan PS50102 RRM 11.230 35-114
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 9.7e-13 13-114
no_ID  
HMMPanther PTHR23139 RNA-BINDING 1.5e-34 22-114
HMMPanther PTHR23139:SF9 SPLICING 1.5e-34 22-114
HMMPfam PF14259 RRM_6 7.2e-09 39-112
Seg seg seg NA 9-28
superfamily SSF54928 RNA-binding 4.2e-12 21-113
Wolf-PSORT
Lj3g3v1981160.1	cyto 10, chlo 2, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1981160.1