Miyakogusa Predicted Gene

Lj3g3v1957980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S319_LOTJA 346 91.0 91.0 (tr|I3S319) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G72175.1 235 64.9 73.5 | Symbols: | RING/U-box protein with domain of unknown function (DUF 1232) | chr1:27157978-27159359 FORWARD LENGTH=185
Medicago Medtr3g005800.1 232 59.7 73.7 | C3HC4-type RING finger protein | HC | chr3:390504-387667 | 20130731
Soybean Glyma04g43430.1 249 66.5 74.1  
LJGI gnl|LJGI|TC59864 1102 99.5 99.5 similar to UniRef100_A7QLW2 Cluster: Chromosome chr18 scaffold_122, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_122, whole genome shotgun sequence - Vitis vinifera (Grape), partial (75%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1957980.1 length: 188 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 0.0082 12-54
ProfileScan PS50089 ZF_RING_2 10.586 12-55
IPR010652 Protein of unknown function DUF1232
HMMPfam PF06803 DUF1232 6e-08 131-168
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.8e-11 11-85
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 27-36
no_ID  
HMMPanther PTHR22894 UNCHARACTERIZED 1.5e-72 1-188
HMMPanther PTHR22894:SF0 SUBFAMILY 1.5e-72 1-188
Seg seg seg NA 155-171
superfamily SSF57850 RING/U-box 6.3e-10 5-76
Wolf-PSORT
Lj3g3v1957980.1	plas 4, E.R. 4, E.R._plas 4, nucl 2, cysk_plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1957980.1