Miyakogusa Predicted Gene
- Lj3g3v1957970.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J063_MEDTR |
194 |
72.3 |
79.2 |
(tr|G7J063) Lysine/histidine transporter OS=Medicago truncatula GN=MTR_3g005740 PE=4 SV=1 |
| TAIR_pep |
AT1G71680.1 |
158 |
64.6 |
73.1 |
| Symbols: | Transmembrane amino acid transporter family protein | chr1:26944671-26946731 FORWARD LENGTH=448 |
| Medicago |
Medtr3g005740.1 |
194 |
72.3 |
79.2 |
| transmembrane amino acid transporter family protein | HC | chr3:362004-359579 | 20130731 |
| Soybean |
Glyma04g43450.1 |
168 |
65.7 |
70.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1957970.1 |
length: 130 aa. |
| IPR013057 |
Amino acid transporter, transmembrane |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01490 |
Aa_trans |
3.1e-27 |
4-130 |
| no_ID |
|
| HMMPanther |
PTHR22950 |
AMINO |
4.4e-31 |
1-130 |
| Seg |
seg |
seg |
NA |
97-108 |
- Wolf-PSORT
Lj3g3v1957970.1 vacu 10, plas 2.5, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1957970.1 |
|