Miyakogusa Predicted Gene
- Lj3g3v1943270.4
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KJF8_SOYBN |
265 |
75.7 |
84.6 |
(tr|K7KJF8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G55690.2 |
132 |
41.3 |
62.3 |
| Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:20808622-20811831 REVERSE LENGTH=625 |
| Medicago |
Medtr8g071000.1 |
176 |
54.8 |
69.0 |
| Sec14p-like phosphatidylinositol transfer family protein | HC | chr8:30105196-30099685 | 20130731 |
| Soybean |
Glyma06g48060.2 |
258 |
73.7 |
82.5 |
|
| LJGI |
gnl|LJGI|TC76925 |
276 |
97.4 |
97.4 |
similar to UniRef100_A7Q9E7 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1943270.4 |
length: 171 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR23324 |
SEC14 |
5.9e-27 |
23-169 |
| HMMPanther |
PTHR23324:SF5 |
SEC14 |
5.9e-27 |
23-169 |
- Wolf-PSORT
Lj3g3v1943270.4 cyto 6.5, cyto_nucl 5.5, nucl 3.5, mito 1, extr 1, pero 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1943270.4 |
|