Miyakogusa Predicted Gene

Lj3g3v1933130.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J0E1_MEDTR 761 86.8 92.1 (tr|G7J0E1) WD-repeat protein-like protein OS=Medicago truncatula GN=MTR_3g010010 PE=4 SV=1
TAIR_pep AT1G55680.1 701 81.4 91.4 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:20804988-20807294 REVERSE LENGTH=445
Medicago Medtr3g010010.2 762 86.8 92.1 | transducin/WD40 repeat protein | HC | chr3:2266588-2260075 | 20130731
Soybean Glyma04g12500.1 733 87.4 94.2  
LJGI gnl|LJGI|TC60439 1491 99.1 99.1 similar to UniRef100_A7QQE6 Cluster: Chromosome undetermined scaffold_142, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_142, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1933130.2 length: 446 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 2.4e-06 309-346
HMMSmart SM00320 WD40 1.1 307-346
350-389
ProfileScan PS50082 WD_REPEATS_2 12.413 314-355
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.9e-33 180-426
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 15.557 314-398
superfamily SSF50978 WD40 3.2e-32 117-426
no_ID  
HMMPanther PTHR22847 WD40 1.2e-228 8-446
HMMPanther PTHR22847:SF102PREDICTED PROTEIN 1.2e-228 8-446
Seg seg seg NA 8-28
35-49
Wolf-PSORT
Lj3g3v1933130.2	nucl 11, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1933130.2