Miyakogusa Predicted Gene

Lj3g3v1933050.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KFV6_SOYBN 394 62.2 73.4 (tr|I1KFV6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G13350.1 284 50.0 62.7 | Symbols: | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain | chr3:4335721-4337804 REVERSE LENGTH=319
Medicago Medtr3g009890.1 310 54.6 62.9 | ARID/bright DNA-binding domain protein | HC | chr3:2204856-2199429 | 20130731
Soybean Glyma06g48010.1 394 62.2 73.4  
LJGI gnl|LJGI|TC63876 1427 99.9 99.9 weakly similar to UniRef100_A7QQE8 Cluster: Chromosome undetermined scaffold_142, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_142, whole genome shotgun sequence - Vitis vinifera (Grape), partial (56%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1933050.2 length: 338 aa.
IPR001606 ARID/BRIGHT DNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005622 intracellular    
Gene3D G3DSA:1.10.150.60 no description 4.3e-26 44-145
HMMPfam PF01388 ARID 9.1e-21 44-131
HMMSmart SM00501 BRIGHT, 4.7e-31 45-136
ProfileScan PS51011 ARID 26.917 44-135
superfamily SSF46774 ARID-like 2.6e-28 44-149
IPR009071 High mobility group (HMG) box domain
Gene3D G3DSA:1.10.30.10 no description 2e-15 259-335
HMMPfam PF00505 HMG_box 1.8e-11 264-331
HMMSmart SM00398 high 1.6e-12 263-332
ProfileScan PS50118 HMG_BOX_2 13.695 264-331
superfamily SSF47095 HMG-box 7.2e-19 244-335
no_ID  
HMMPanther PTHR22970 FAMILY 6.6e-22 22-136
HMMSmart SM01014 ARID/BRIGHT 2.2e-31 41-131
Seg seg seg NA 10-23
194-207
Wolf-PSORT
Lj3g3v1933050.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1933050.2