Miyakogusa Predicted Gene

Lj3g3v1918710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0N9_SOYBN 395 39.7 57.3 (tr|K7N0N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 359 38.3 55.3 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 389 38.7 55.6 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma07g29110.1 306 34.4 52.9  
LJGI gnl|LJGI|TC81373 373 83.4 83.4 similar to UniRef100_A7PSR1 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1918710.1 length: 623 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.039 52-73
474-502
HMMPfam PF12854 PPR_1 5.2e-06 106-138
212-243
HMMPfam PF13041 PPR_2 3.5e-16 147-193
258-307
HMMTigr TIGR00756 PPR: 1.1e-07 79-112
113-147
149-182
184-217
219-251
261-295
ProfileScan PS51375 PPR 9.536 41-75
76-110
111-145
146-180
181-215
216-250
259-293
294-324
343-377
378-412
471-505
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.3e-05 89-300
no_ID  
HMMPanther PTHR24015 FAMILY 1.5e-88 49-517
HMMPanther PTHR24015:SF0 SUBFAMILY 1.5e-88 49-517
Seg seg seg NA 159-173
superfamily SSF48452 TPR-like 2.2e-07 90-276
Wolf-PSORT
Lj3g3v1918710.1	chlo 6, plas 3, vacu 2, nucl_plas 2, E.R._plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1918710.1