Miyakogusa Predicted Gene

Lj3g3v1918700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6HQE5_VITVI 245 43.4 60.6 (tr|F6HQE5) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00930 PE=4 SV=1
TAIR_pep AT5G39710.1 226 42.9 60.0 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 253 46.4 60.4 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma07g29110.1 166 33.7 50.7  
LJGI gnl|LJGI|TC82170 262 85.2 85.2 weakly similar to UniRef100_A7P9F5 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1918700.1 length: 338 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.018 61-89
189-217
HMMPfam PF12854 PPR_1 1e-08 4-32
HMMTigr TIGR00756 PPR: 0.0015 189-220
ProfileScan PS51375 PPR 9.536 9-39
58-92
93-127
186-220
no_ID  
HMMPanther PTHR24015 FAMILY 2.8e-14 1-337
HMMPanther PTHR24015:SF0 SUBFAMILY 2.8e-14 1-337
Wolf-PSORT
Lj3g3v1918700.1	cyto 3, golg 3, plas 2.5, cyto_nucl 2.5, E.R._plas 2.5, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1918700.1