database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | A5BP73_VITVI | 590 | 66.3 | 75.7 | (tr|A5BP73) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0107g00320 PE=4 SV=1 |
TAIR_pep | AT4G33270.1 | 552 | 63.0 | 74.9 | | Symbols: CDC20.1 | Transducin family protein / WD-40 repeat family protein | chr4:16044545-16046590 REVERSE LENGTH=457 |
Medicago | Medtr7g106870.1 | 578 | 67.6 | 76.5 | | transducin family protein/WD-40 repeat protein | HC | chr7:43528726-43526248 | 20130731 |
Soybean | Glyma03g36300.1 | 585 | 66.7 | 77.4 | |
LJGI | gnl|LJGI|TC70533 | 200 | 87.3 | 87.3 | homologue to UniRef100_A7QN78 Cluster: Chromosome undetermined scaffold_131, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome undetermined scaffold_131, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%) |
Lj3g3v1906530.1 | length: 438 aa. | |||
IPR001680 | WD40 repeat | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0005515 | protein binding | ||
HMMPfam | PF00400 | WD40 | 5.2e-07 | 166-199 208-236 248-283 292-330 383-417 |
HMMSmart | SM00320 | WD40 | 5.9e-06 | 160-199 202-240 244-283 288-330 335-375 378-417 |
ProfileScan | PS50082 | WD_REPEATS_2 | 13.148 | 167-208 251-283 385-418 |
IPR015943 | WD40/YVTN repeat-like-containing domain | |||
Molecular Function | GO:0005515 | protein binding | ||
Gene3D | G3DSA:2.130.10.10 | no description | 2.2e-54 | 149-420 |
IPR017986 | WD40-repeat-containing domain | |||
Molecular Function | GO:0005515 | protein binding | ||
ProfileScan | PS50294 | WD_REPEATS_REGION | 32.430 | 167-426 |
superfamily | SSF50978 | WD40 | 7e-58 | 139-431 |
IPR019775 | WD40 repeat, conserved site | |||
PatternScan | PS00678 | WD_REPEATS_1 | NA | 186-200 404-418 |
no_ID | ||||
HMMPanther | PTHR19918 | CELL | 1.5e-170 | 19-438 |
HMMPanther | PTHR19918:SF0 | SUBFAMILY | 1.5e-170 | 19-438 |
Seg | seg | seg | NA | 96-111 |
Lj3g3v1906530.1 mito 5, nucl 4, cyto 2, cysk 2, nucl_plas 2
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj3g3v1906530.1 |