Miyakogusa Predicted Gene

Lj3g3v1896330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MIM1_SOYBN 1674 82.1 86.9 (tr|I1MIM1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G12280.2 1321 66.2 76.2 | Symbols: RBR1 | retinoblastoma-related 1 | chr3:3913671-3918433 REVERSE LENGTH=1012
Medicago Medtr8g040560.1 1649 80.5 86.1 | retinoblastoma-related protein | HC | chr8:15105699-15098148 | 20130731
Soybean Glyma15g36890.1 1674 82.1 86.9  
LJGI gnl|LJGI|TC82665 1542 95.2 95.2 similar to UniRef100_A9UL14 Cluster: Retinoblastoma-related protein; n=1; Medicago sativa|Rep: Retinoblastoma-related protein - Medicago sativa (Alfalfa), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1896330.1 length: 1022 aa.
IPR002719 Retinoblastoma-associated protein, B-box
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0051726 regulation of cell cycle    
HMMPfam PF01857 RB_B 3.4e-50 739-871
IPR002720 Retinoblastoma-associated protein, A-box
Cellular Component GO:0005634 nucleus    
Biological Process GO:0051726 regulation of cell cycle    
HMMPfam PF01858 RB_A 9.5e-73 414-615
IPR013763 Cyclin-like
Gene3D G3DSA:1.10.472.10 no description 1.3e-44 422-605
732-911
superfamily SSF47954 Cyclin-like 2.9e-52 421-619
738-911
IPR024599 Domain of unknown function DUF3452, retinoblastoma-associated
HMMPfam PF11934 DUF3452 4.3e-36 93-231
no_ID  
HMMPanther PTHR13742 RETINOBLASTOMA-ASSOCIATED 0 5-1013
HMMPanther PTHR13742:SF1 RETINOBLASTOMA-RELATED 0 5-1013
Seg seg seg NA 355-371
700-723
1005-1012
Wolf-PSORT
Lj3g3v1896330.1	nucl 6, cyto 3, cysk_nucl 3, vacu 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1896330.1