Miyakogusa Predicted Gene
- Lj3g3v1876170.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SLM9_LOTJA |
204 |
86.8 |
86.8 |
(tr|I3SLM9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G57040.1 |
135 |
58.8 |
64.9 |
| Symbols: ARR9, ATRR4 | response regulator 9 | chr3:21110059-21111228 FORWARD LENGTH=234 |
| Medicago |
Medtr8g038620.1 |
169 |
72.9 |
76.0 |
| two-component response regulator ARR3-like protein | HC | chr8:14326128-14324370 | 20130731 |
| Soybean |
Glyma15g37770.1 |
171 |
72.4 |
76.4 |
|
| LJGI |
gnl|LJGI|TC73362 |
666 |
100.0 |
100.0 |
homologue to UniRef100_Q1RU46 Cluster: Response regulator receiver; n=1; Medicago truncatula|Rep: Response regulator receiver - Medicago truncatula (Barrel medic), partial (50%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1876170.3 |
length: 121 aa. |
| IPR001789 |
Signal transduction response regulator, receiver domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0000156 |
phosphorelay response regulator activity |
|
|
| Biological Process |
GO:0000160 |
phosphorelay signal transduction system |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF00072 |
Response_reg |
1.8e-09 |
52-120 |
| ProfileScan |
PS50110 |
RESPONSE_REGULATORY |
19.027 |
12-121 |
| IPR011006 |
CheY-like superfamily |
| superfamily |
SSF52172 |
CheY-like |
7.6e-14 |
5-119 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.2300 |
no description |
1.5e-21 |
8-120 |
| HMMPanther |
PTHR26402 |
RESPONSE |
7.7e-39 |
3-121 |
| HMMPanther |
PTHR26402:SF256TWO-COMPONENT |
RESPONSE |
7.7e-39 |
3-121 |
- Wolf-PSORT
Lj3g3v1876170.3 cyto 6, chlo 2, nucl 2, mito 1, plas 1, vacu 1, E.R. 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1876170.3 |
|