Miyakogusa Predicted Gene
- Lj3g3v1833060.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6T846_SOYBN |
256 |
58.1 |
67.5 |
(tr|C6T846) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT2G42760.1 |
106 |
38.3 |
57.2 |
| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | chr2:17796382-17797185 REVERSE LENGTH=267 |
| Medicago |
Medtr4g080340.1 |
226 |
51.5 |
63.8 |
| DUF1685 family protein | HC | chr4:31166162-31167125 | 20130731 |
| Soybean |
Glyma12g15530.1 |
256 |
58.1 |
67.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1833060.1 |
length: 251 aa. |
| IPR012881 |
Protein of unknown function DUF1685 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07939 |
DUF1685 |
1.5e-05 |
135-169 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
176-194 |
- Wolf-PSORT
Lj3g3v1833060.1 nucl 6, cyto 4, chlo 2, extr 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1833060.1 |
|