Miyakogusa Predicted Gene
- Lj3g3v1695680.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SZK7_LOTJA |
514 |
95.3 |
95.7 |
(tr|I3SZK7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G20870.1 |
427 |
75.4 |
85.9 |
| Symbols: ZTP29 | ZIP metal ion transporter family | chr3:7309499-7312476 REVERSE LENGTH=276 |
| Medicago |
Medtr2g098150.1 |
461 |
83.7 |
89.1 |
| ZIP metal ion transporter family protein | HC | chr2:41950337-41945732 | 20130731 |
| Soybean |
Glyma13g41580.2 |
477 |
88.4 |
91.3 |
|
| LJGI |
gnl|LJGI|TC63105 |
1653 |
100.0 |
100.0 |
similar to UniRef100_A7NZT4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1695680.1 |
length: 276 aa. |
| IPR003689 |
Zinc/iron permease |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| Biological Process |
GO:0030001 |
metal ion transport |
|
|
| Molecular Function |
GO:0046873 |
metal ion transmembrane transporter activity |
|
|
| Biological Process |
GO:0055085 |
transmembrane transport |
|
|
| HMMPfam |
PF02535 |
Zip |
7.1e-22 |
100-261 |
| no_ID |
|
| HMMPanther |
PTHR11065 |
SOLUTE |
2.9e-93 |
1-275 |
| HMMPanther |
PTHR11065:SF5 |
SUBFAMILY |
2.9e-93 |
1-275 |
| Seg |
seg |
seg |
NA |
154-165 |
- Wolf-PSORT
Lj3g3v1695680.1 chlo 3, cyto 3, plas 3, cyto_plas 3, pero 2, E.R._plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1695680.1 |
|