Miyakogusa Predicted Gene

Lj3g3v1684630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1M507_SOYBN 1332 76.4 82.9 (tr|I1M507) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G14700.1 989 69.7 82.3 | Symbols: ATORC1A, ORC1A | origin recognition complex 1 | chr4:8422236-8424665 FORWARD LENGTH=809
Medicago Medtr8g099640.1 1288 82.1 87.5 | origin recognition complex subunit 1 | HC | chr8:42142602-42133661 | 20130731
Soybean Glyma13g41490.1 1332 76.4 82.9  
LJGI gnl|LJGI|AV427579 791 100.0 100.0 similar to UniRef100_A7NZS0 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1684630.1 length: 868 aa.
IPR001025 Bromo adjacent homology (BAH) domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF01426 BAH 2.2e-14 291-386
HMMSmart SM00439 Bromo 3.5e-09 187-387
ProfileScan PS51038 BAH 18.182 270-387
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 5.7e-08 214-259
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.3e-06 511-665
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 4.2e-17 516-660
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 2.4e-15 197-277
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.6e-16 198-265
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 215-258
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 4.4e-09 215-260
ProfileScan PS50016 ZF_PHD_2 9.757 212-261
IPR020793 Origin recognition complex, subunit 1
Cellular Component GO:0000808 origin recognition complex    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006260 DNA replication    
HMMPanther PTHR10763:SF6 ORIGIN 3.2e-235 174-868
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3e-38 470-741
no_ID  
Gene3D G3DSA:1.10.8.60 no description 6.4e-16 659-732
Gene3D G3DSA:3.40.50.300 no description 4.2e-21 488-658
HMMPanther PTHR10763 CELL 3.2e-235 174-868
Seg seg seg NA 36-51
84-101
131-152
174-184
Wolf-PSORT
Lj3g3v1684630.1	chlo 9.5, chlo_mito 6.33333, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1684630.1