Miyakogusa Predicted Gene
- Lj3g3v1682540.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3STM5_LOTJA |
173 |
98.8 |
100.0 |
(tr|I3STM5) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT2G29530.2 |
132 |
71.1 |
84.3 |
| Symbols: TIM10 | Tim10/DDP family zinc finger protein | chr2:12641026-12642243 REVERSE LENGTH=83 |
| Medicago |
Medtr2g097870.1 |
152 |
87.7 |
95.1 |
| import inner membrane translocase protein | HC | chr2:41812760-41810550 | 20130731 |
| Soybean |
Glyma02g47850.2 |
165 |
97.4 |
98.7 |
|
| LJGI |
gnl|LJGI|BW599179 |
500 |
100.0 |
100.0 |
similar to UniRef100_Q9XH47 Cluster: Small zinc finger-like protein; n=1; Pinus taeda|Rep: Small zinc finger-like protein - Pinus taeda (Loblolly pine), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1682540.1 |
length: 82 aa. |
| IPR004217 |
Tim10/DDP family zinc finger |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.10.287.810 |
no description |
1.5e-20 |
16-75 |
| HMMPfam |
PF02953 |
zf-Tim10_DDP |
1.5e-23 |
14-75 |
| superfamily |
SSF144122 |
Tim10-like |
1.6e-17 |
19-82 |
| IPR027247 |
Mitochondrial import inner membrane translocase subunit Tim10/Tim12 |
| Biological Process |
GO:0045039 |
protein import into mitochondrial inner membrane |
|
|
| HMMPanther |
PTHR11038 |
MITOCHONDRIAL |
5.6e-47 |
1-77 |
| no_ID |
|
| HMMPanther |
PTHR11038:SF11 |
SUBFAMILY |
5.6e-47 |
1-77 |
- Wolf-PSORT
Lj3g3v1682540.1 chlo 5, mito 3, nucl 2, extr 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1682540.1 |
|