Miyakogusa Predicted Gene

Lj3g3v1666260.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S647_LOTJA 392 78.7 79.5 (tr|I3S647) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G55530.1 283 53.5 64.7 | Symbols: SDIR1 | RING/U-box superfamily protein | chr3:20595300-20597188 REVERSE LENGTH=273
Medicago Medtr4g064560.2 296 53.8 64.0 | zinc finger, C3HC4 type (RING finger) protein | HC | chr4:24093588-24088996 | 20130731
Soybean Glyma11g14590.2 357 65.0 71.2  
LJGI gnl|LJGI|TC79331 1628 99.9 99.9 similar to UniRef100_A7PIR9 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (84%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1666260.1 length: 274 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 7.1e-15 211-253
HMMSmart SM00184 Ring 2.2e-08 212-252
ProfileScan PS50089 ZF_RING_2 12.666 212-253
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.3e-17 208-255
no_ID  
HMMPanther PTHR22766 RING 2.8e-55 18-271
HMMPanther PTHR22766:SF1 GB 2.8e-55 18-271
Seg seg seg NA 80-102
118-133
179-190
superfamily SSF57850 RING/U-box 3.5e-19 205-259
Wolf-PSORT
Lj3g3v1666260.1	plas 4.5, E.R. 4, cyto_plas 4, cyto 2.5, E.R._vacu 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1666260.1