Miyakogusa Predicted Gene
- Lj3g3v1666210.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MJR0_SOYBN |
196 |
50.0 |
61.4 |
(tr|K7MJR0) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G33770.1 |
145 |
40.3 |
54.2 |
| Symbols: UBC24, ATUBC24, PHO2 | phosphate 2 | chr2:14277785-14281482 REVERSE LENGTH=907 |
| Medicago |
Medtr7g451800.1 |
182 |
48.3 |
59.3 |
| ubiquitin-conjugating enzyme | LC | chr7:17657882-17658874 | 20130731 |
| Soybean |
Glyma17g03790.1 |
187 |
49.5 |
60.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1666210.1 |
length: 228 aa. |
| IPR000608 |
Ubiquitin-conjugating enzyme, E2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016881 |
acid-amino acid ligase activity |
|
|
| HMMPfam |
PF00179 |
UQ_con |
4e-25 |
43-170 |
| ProfileScan |
PS50127 |
UBIQUITIN_CONJUGAT_2 |
21.492 |
42-165 |
| IPR016135 |
Ubiquitin-conjugating enzyme/RWD-like |
| Gene3D |
G3DSA:3.10.110.10 |
no description |
1.3e-44 |
7-183 |
| superfamily |
SSF54495 |
UBC-like |
1.6e-33 |
34-197 |
| no_ID |
|
| HMMPanther |
PTHR24067 |
UBIQUITIN-CONJUGATING |
4.3e-60 |
1-187 |
| HMMPanther |
PTHR24067:SF22 |
UBIQUITIN |
4.3e-60 |
1-187 |
| HMMSmart |
SM00212 |
Ubiquitin-conjugating |
1.6e-25 |
42-197 |
| Seg |
seg |
seg |
NA |
145-161 |
- Wolf-PSORT
Lj3g3v1666210.1 cyto 6.5, cyto_E.R. 4, nucl 3, extr 2, chlo 1, mito 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1666210.1 |
|