Miyakogusa Predicted Gene

Lj3g3v1544540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M3I2_SOYBN 1118 72.4 80.0 (tr|I1M3I2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G54730.1 396 38.9 52.2 | Symbols: ATATG18F, ATG18F, G18F | homolog of yeast autophagy 18 (ATG18) F | chr5:22233977-22236804 REVERSE LENGTH=763
Medicago Medtr2g082770.1 1114 73.8 79.5 | breast carcinoma amplified sequence 3 protein | HC | chr2:34734357-34727900 | 20130731
Soybean Glyma13g36290.3 1106 70.0 77.3  
LJGI gnl|LJGI|TC75239 890 99.8 99.8 weakly similar to UniRef100_A7P0Z1 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1544540.1 length: 725 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 5.6e-05 253-281
HMMSmart SM00320 WD40 61 73-108
251-291
307-348
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 1.5e-12 242-350
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 2.3e-12 64-432
IPR022175 Breast carcinoma amplified sequence 3
HMMPfam PF12490 BCAS3 1.7e-65 400-633
no_ID  
HMMPanther PTHR13268 BREAST 1.8e-127 1-656
Seg seg seg NA 83-96
122-142
425-429
Wolf-PSORT
Lj3g3v1544540.1	nucl 7, chlo 3, cyto 2, cysk 1.5, chlo_mito 1.5, cysk_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1544540.1