Miyakogusa Predicted Gene

Lj3g3v1543530.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7M2H1_SOYBN 1355 67.7 74.1 (tr|K7M2H1) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G20720.2 778 50.5 66.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. | chr3:7240098-7246754 FORWARD LENGTH=1199

Medicago Medtr2g082910.1 1235 74.9 83.6 | amine-terminal region of chorein, A TM vesicle-mediated sorter | HC | chr2:34763162-34776814 | 20130731

Soybean Glyma13g36300.1 1205 65.6 72.3

LJGI gnl|LJGI|TC59483 1221 99.8 99.8 similar to UniRef100_A7P0Z0 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v1543530.1 length: 918 aa.

IPR026728 UHRF1-binding protein 1-like

method AccNumber shortName E-value location

HMMPanther PTHR22774 UNCHARACTERIZED 3.2e-205 1-916

no_ID

HMMPanther PTHR22774:SF4 UNKNOWN 3.2e-205 1-916

Seg seg seg NA 328-339
651-658

Wolf-PSORT

Lj3g3v1543530.1 chlo 8.5, chlo_mito 6, mito 2.5, nucl 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v1543530.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7M2H1_SOYBN	1355	67.7	74.1	(tr\|K7M2H1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G20720.2	778	50.5	66.2	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. \| chr3:7240098-7246754 FORWARD LENGTH=1199
Medicago	Medtr2g082910.1	1235	74.9	83.6	\| amine-terminal region of chorein, A TM vesicle-mediated sorter \| HC \| chr2:34763162-34776814 \| 20130731
Soybean	Glyma13g36300.1	1205	65.6	72.3
LJGI	gnl\|LJGI\|TC59483	1221	99.8	99.8	similar to UniRef100_A7P0Z0 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)

IPR026728	UHRF1-binding protein 1-like
Lj3g3v1543530.1				length: 918 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR22774	UNCHARACTERIZED	3.2e-205	1-916
no_ID
HMMPanther	PTHR22774:SF4	UNKNOWN	3.2e-205	1-916
Seg	seg	seg	NA	328-339 651-658