Miyakogusa Predicted Gene

Lj3g3v1543510.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JFF5_SOYBN 684 87.8 93.8 (tr|I1JFF5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G20740.1 595 74.5 85.6 | Symbols: FIE, FIS3, FIE1 | Transducin/WD40 repeat-like superfamily protein | chr3:7249064-7252254 REVERSE LENGTH=369
Medicago Medtr1g028310.2 649 81.7 92.3 | fertilization-independent endosperm protein | HC | chr1:9510205-9513474 | 20130731
Soybean Glyma02g17110.1 684 87.8 93.8  
LJGI gnl|LJGI|TC58292 2222 99.9 99.9 similar to UniRef100_A8VFL1 Cluster: FIE; n=1; Glycine max|Rep: FIE - Glycine max (Soybean), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1543510.1 length: 373 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 2.5e-09 122-158
173-204
HMMSmart SM00320 WD40 0.52 83-115
118-158
161-204
230-267
279-320
325-366
ProfileScan PS50082 WD_REPEATS_2 12.380 125-167
171-213
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 4.5e-44 21-366
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 19.723 80-373
superfamily SSF50978 WD40 3.2e-44 22-366
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 145-159
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 2.6e-05 145-159
191-205
254-268
no_ID  
HMMPanther PTHR10253 POLYCOMB 1.8e-250 7-369
HMMPanther PTHR10253:SF2 FERTILIZATION-INDEPENDENT 1.8e-250 7-369
Wolf-PSORT
Lj3g3v1543510.1	nucl 3, cyto 3, extr 3, cyto_nucl 3, chlo 2, plas 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1543510.1