Miyakogusa Predicted Gene

Lj3g3v1543490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LW88_SOYBN 392 68.4 77.7 (tr|K7LW88) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G04790.1 224 39.7 62.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:2435007-2439344 REVERSE LENGTH=821
Medicago Medtr4g081220.1 257 46.7 64.5 | PPR containing plant-like protein | HC | chr4:31456316-31468677 | 20130731
Soybean Glyma12g34220.1 391 68.4 77.7  
LJGI gnl|LJGI|TC68036 1542 98.8 98.8 weakly similar to UniRef100_A7P0Y7 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1543490.1 length: 292 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.16 100-119
136-161
HMMPfam PF13041 PPR_2 1.2e-09 29-73
HMMTigr TIGR00756 PPR: 6.4e-07 32-65
ProfileScan PS51375 PPR 5.733 1-28
29-63
96-127
130-164
no_ID  
HMMPanther PTHR24015 FAMILY 1e-54 1-269
HMMPanther PTHR24015:SF34 PENTATRICOPEPTIDE 1e-54 1-269
Seg seg seg NA 181-191
221-234
Wolf-PSORT
Lj3g3v1543490.1	cyto 9, chlo 1, nucl 1, mito 1, extr 1, golg 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1543490.1