Miyakogusa Predicted Gene
- Lj3g3v1531180.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M2V9_SOYBN |
147 |
58.3 |
68.5 |
(tr|K7M2V9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G54200.1 |
63.5 |
32.6 |
59.8 |
| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:20065731-20066438 FORWARD LENGTH=235 |
| Medicago |
Medtr2g088610.1 |
136 |
53.1 |
65.4 |
| late embryogenesis abundant protein | LC | chr2:37362127-37361558 | 20130731 |
| Soybean |
Glyma13g38400.1 |
143 |
57.0 |
66.4 |
|
| LJGI |
gnl|LJGI|TC74700 |
60.0 |
97.1 |
97.1 |
similar to UniRef100_UPI00006A19B9 Cluster: Cip1-interacting zinc finger protein (Nuclear protein NP94).; n=1; Xenopus tropicalis|Rep: Cip1-interacting zinc finger protein (Nuclear protein NP94). - Xenopus tropicalis, partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1531180.1 |
length: 128 aa. |
| IPR004864 |
Late embryogenesis abundant protein, LEA-14 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03168 |
LEA_2 |
1.6e-09 |
9-108 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
105-115 |
- Wolf-PSORT
Lj3g3v1531180.1 cyto 6, chlo 4, extr 3, cyto_nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1531180.1 |
|