Miyakogusa Predicted Gene
- Lj3g3v1530160.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S4C1_LOTJA |
236 |
100.0 |
100.0 |
(tr|I3S4C1) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT4G27130.1 |
212 |
88.6 |
96.5 |
| Symbols: | Translation initiation factor SUI1 family protein | chr4:13604814-13605525 REVERSE LENGTH=113 |
| Medicago |
Medtr2g083180.1 |
229 |
96.5 |
98.2 |
| eukaryotic translation initiation factor SUI1 | HC | chr2:34914054-34918165 | 20130731 |
| Soybean |
Glyma12g16390.1 |
220 |
93.9 |
97.4 |
|
| LJGI |
gnl|LJGI|FS337734 |
690 |
100.0 |
100.0 |
homologue to UniRef100_O48650 Cluster: Protein translation factor SUI1 homolog; n=1; Salix bakko|Rep: Protein translation factor SUI1 homolog - Salix bakko (Japanese willow), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1530160.1 |
length: 114 aa. |
| IPR001950 |
Translation initiation factor SUI1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003743 |
translation initiation factor activity |
|
|
| Biological Process |
GO:0006413 |
translational initiation |
|
|
| Gene3D |
G3DSA:3.30.780.10 |
no description |
5.5e-50 |
7-114 |
| HMMPfam |
PF01253 |
SUI1 |
2.8e-28 |
28-106 |
| ProfileScan |
PS50296 |
SUI1 |
24.550 |
32-102 |
| superfamily |
SSF55159 |
eIF1-like |
3.9e-32 |
4-114 |
| IPR005874 |
Eukaryotic translation initiation factor SUI1 |
| Molecular Function |
GO:0003743 |
translation initiation factor activity |
|
|
| HMMPIR |
PIRSF004499 |
Translation |
6.3e-76 |
1-114 |
| HMMTigr |
TIGR01160 |
SUI1_MOF2: |
5.2e-56 |
9-114 |
| no_ID |
|
| HMMPanther |
PTHR10388 |
EUKARYOTIC |
3.6e-69 |
1-114 |
- Wolf-PSORT
Lj3g3v1530160.1 cysk 9, cyto 2, chlo 1, nucl 1, extr 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1530160.1 |
|