Miyakogusa Predicted Gene
- Lj3g3v1528030.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IM52_MEDTR |
108 |
69.6 |
78.5 |
(tr|G7IM52) Disease-resistance protein OS=Medicago truncatula GN=MTR_2g083650 PE=4 SV=1 |
| TAIR_pep |
AT1G69550.1 |
58.2 |
43.2 |
65.4 |
| Symbols: | disease resistance protein (TIR-NBS-LRR class) | chr1:26148836-26153374 REVERSE LENGTH=1400 |
| Medicago |
Medtr2g083650.1 |
109 |
69.6 |
78.5 |
| disease resistance protein (TIR-NBS-LRR class), putative | LC | chr2:35106376-35101094 | 20130731 |
| Soybean |
Glyma12g34020.1 |
91.7 |
55.1 |
74.4 |
|
| LJGI |
gnl|LJGI|DC593321 |
111 |
89.6 |
89.6 |
weakly similar to UniRef100_A7QH95 Cluster: Chromosome chr18 scaffold_96, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_96, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1528030.1 |
length: 158 aa. |
| IPR001611 |
Leucine-rich repeat |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00560 |
LRR_1 |
0.14 |
60-78 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
1.7e-07 |
9-81 |
| Seg |
seg |
seg |
NA |
148-153 |
| superfamily |
SSF52058 |
L |
4e-08 |
6-98 |
- Wolf-PSORT
Lj3g3v1528030.1 nucl 6, cyto 4, chlo 2, extr 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1528030.1 |
|