Miyakogusa Predicted Gene
- Lj3g3v1440190.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KCK7_SOYBN |
452 |
87.7 |
91.3 |
(tr|K7KCK7) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G00060.1 |
348 |
69.3 |
79.3 |
| Symbols: MEE44 | Nucleotidyltransferase family protein | chr4:21437-27996 FORWARD LENGTH=1481 |
| Medicago |
Medtr4g027425.1 |
465 |
89.7 |
92.1 |
| nucleotidyltransferase family protein | HC | chr4:9491496-9506334 | 20130731 |
| Soybean |
Glyma03g03890.2 |
451 |
87.7 |
91.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1440190.3 |
length: 253 aa. |
| IPR002058 |
PAP/25A-associated |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03828 |
PAP_assoc |
5.6e-07 |
145-198 |
| no_ID |
|
| HMMPanther |
PTHR23092 |
TOPOISOMERASE-RELATED |
4.9e-87 |
1-231 |
| HMMPanther |
PTHR23092:SF1 |
TOPOISOMERASE-RELATED |
4.9e-87 |
1-231 |
| superfamily |
SSF81631 |
PAP/OAS1 |
2.4e-29 |
93-236 |
- Wolf-PSORT
Lj3g3v1440190.3 nucl 6, cyto 6, cyto_nucl 6
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1440190.3 |
|