Miyakogusa Predicted Gene

Lj3g3v1438160.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6GV56_VITVI 348 53.4 63.3 (tr|F6GV56) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02720 PE=4 SV=1
TAIR_pep AT3G60580.1 209 41.6 51.8 | Symbols: | C2H2-like zinc finger protein | chr3:22394007-22394873 FORWARD LENGTH=288
Medicago Medtr0160s0030.1 387 56.9 65.9 | C2H2-type zinc finger protein, putative | HC | scaffold0160:20867-19377 | 20130731
Soybean Glyma03g03950.1 287 45.7 53.3  
LJGI gnl|LJGI|TC75956 56.0 94.4 94.4 similar to UniRef100_A7QJE2 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1438160.1 length: 380 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 6-26
244-264
300-320
ProfileScan PS50157 ZINC_FINGER_C2H2_2 9.328 4-26
242-269
298-325
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 0.22 4-26
242-264
298-320
no_ID  
Coil coil coiled-coil NA 193-233
HMMPanther PTHR11389 ZINC 1.3e-29 6-320
HMMPanther PTHR11389:SF380ZINC FINGER 1.3e-29 6-320
HMMPfam PF13912 zf-C2H2_6 1.8e-07 4-27
242-266
297-320
Seg seg seg NA 46-62
185-228
superfamily SSF57667 C2H2 1.9e-05 2-264
238-321
Wolf-PSORT
Lj3g3v1438160.1	nucl 12.5, cyto_nucl 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1438160.1