Miyakogusa Predicted Gene

Lj3g3v1427070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KCN0_SOYBN 1590 84.3 90.2 (tr|K7KCN0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G32010.1 771 48.1 61.5 | Symbols: HSL1, HSI2-L1, VAL2 | HSI2-like 1 | chr4:15481231-15484897 FORWARD LENGTH=780
Medicago Medtr4g028130.4 1540 82.3 88.7 | AP2/B3 transcription factor family protein | HC | chr4:9697419-9704727 | 20130731
Soybean Glyma03g04330.1 1335 72.9 77.9  
LJGI gnl|LJGI|TC65880 1108 98.8 98.8 similar to UniRef100_A7QFN8 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1427070.1 length: 908 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 3.8e-17 322-421
HMMSmart SM01019 B3 6e-20 322-422
ProfileScan PS50863 B3 11.138 322-423
IPR011124 Zinc finger, CW-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF07496 zf-CW 2.3e-08 592-635
ProfileScan PS51050 ZF_CW 13.392 587-637
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 9.3e-29 314-429
superfamily SSF101936 DNA-binding 3.7e-19 316-430
no_ID  
Coil coil coiled-coil NA 640-661
HMMPanther PTHR23336 ZINC 1.1e-110 248-903
HMMPanther PTHR23336:SF2 SUBFAMILY 1.1e-110 248-903
Seg seg seg NA 688-702
Wolf-PSORT
Lj3g3v1427070.1	nucl 10, chlo 2, plas 1, pero 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1427070.1