Miyakogusa Predicted Gene

Lj3g3v1411740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MHA4_SOYBN 410 99.0 99.5 (tr|K7MHA4) Uncharacterized protein (Fragment) OS=Glycine max PE=3 SV=1
TAIR_pep AT1G55520.2 383 93.0 95.0 | Symbols: TBP2, ATTBP2 | TATA binding protein 2 | chr1:20726150-20727483 REVERSE LENGTH=200
Medicago Medtr7g072580.3 401 97.5 98.5 | transcription factor TFIID protein | HC | chr7:27011311-27016034 | 20130731
Soybean Glyma16g25450.4 407 99.0 99.5  
LJGI gnl|LJGI|TC59431 1086 99.8 99.8 homologue to UniRef100_Q42808 Cluster: TATA-box-binding protein; n=1; Glycine max|Rep: TATA-box-binding protein - Glycine max (Soybean), partial (92%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1411740.1 length: 200 aa.
IPR000814 TATA-box binding protein
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006352 DNA-dependent transcription, initiation    
FPrintScan PR00686 TIFACTORIID 6.8e-69 25-40
49-68
68-86
115-131
139-154
158-174
HAMAP MF_00408 TATA_bind_prot_arch 27.893 19-198
HMMPanther PTHR10126 TATA-BOX 2.7e-146 6-197
HMMPfam PF00352 TBP 4.2e-35 23-105
110-195
PatternScan PS00351 TFIID NA 143-192
52-101
IPR012295 Beta2-adaptin/TBP, C-terminal domain
Gene3D G3DSA:3.30.310.10 no description 8.1e-36 19-105
106-196
no_ID  
superfamily SSF55945 TATA-box 4.3e-32 105-197
19-106
Wolf-PSORT
Lj3g3v1411740.1	nucl 10, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1411740.1