Miyakogusa Predicted Gene
- Lj3g3v1410690.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9R8H5_RICCO |
66.6 |
30.0 |
44.2 |
(tr|B9R8H5) Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1599830 PE=4 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr3g114990.1 |
49.3 |
26.3 |
41.3 |
| ubiquitin-protein ligase | HC | chr3:53705316-53703014 | 20130731 |
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1410690.1 |
length: 233 aa. |
| IPR005174 |
Protein of unknown function DUF295 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03478 |
DUF295 |
2.9e-10 |
138-190 |
- Wolf-PSORT
Lj3g3v1410690.1 extr 9, cyto 2, chlo 1, nucl 1, golg 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1410690.1 |
|