Miyakogusa Predicted Gene
- Lj3g3v1408590.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LGB3_MEDTR |
592 |
69.7 |
81.2 |
(tr|G7LGB3) Cc-nbs-lrr resistance protein OS=Medicago truncatula GN=MTR_8g079490 PE=4 SV=1 |
| TAIR_pep |
AT5G66900.1 |
278 |
39.6 |
58.5 |
| Symbols: | Disease resistance protein (CC-NBS-LRR class) family | chr5:26714931-26717757 REVERSE LENGTH=809 |
| Medicago |
Medtr0391s0020.1 |
606 |
72.2 |
84.1 |
| LRR and NB-ARC domain disease resistance protein | HC | scaffold0391:7230-13590 | 20130731 |
| Soybean |
Glyma17g21200.1 |
578 |
70.9 |
81.7 |
|
| LJGI |
gnl|LJGI|TC72152 |
1578 |
99.5 |
99.5 |
similar to UniRef100_Q6YIA0 Cluster: Disease resistance protein-like protein MsR1; n=1; Medicago sativa|Rep: Disease resistance protein-like protein MsR1 - Medicago sativa (Alfalfa), partial (25%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1408590.1 |
length: 415 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
3.7e-24 |
162-376 |
| HMMPanther |
PTHR23155 |
LEUCINE-RICH |
2.8e-41 |
1-377 |
| HMMPanther |
PTHR23155:SF230OS11G0674500 |
PROTEIN |
2.8e-41 |
1-377 |
| superfamily |
SSF52047 |
RNI-like |
2.1e-30 |
170-378 |
- Wolf-PSORT
Lj3g3v1408590.1 nucl 10, cyto 2, plas 1, golg 1, golg_plas 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1408590.1 |
|