Miyakogusa Predicted Gene

Lj3g3v1393590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JL30_SOYBN 559 76.9 85.0 (tr|I1JL30) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G01720.1 385 58.6 71.8 | Symbols: | RNI-like superfamily protein | chr5:267118-270391 REVERSE LENGTH=665
Medicago Medtr4g013255.1 547 73.8 82.6 | F-box/LRR protein | HC | chr4:3659491-3663944 | 20130731
Soybean Glyma03g05210.1 558 76.9 85.0  
LJGI gnl|LJGI|TC80243 1340 99.9 99.9 similar to UniRef100_A7QFH1 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1393590.1 length: 386 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 12 24-48
49-74
75-100
101-126
127-150
151-176
177-202
203-228
229-253
254-279
280-304
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.2e-09 17-244
245-339
HMMPanther PTHR23125 F-BOX/LEUCINE 1.8e-89 24-305
HMMPanther PTHR23125:SF56 F-BOX 1.8e-89 24-305
HMMPfam PF13516 LRR_6 0.0089 127-150
177-200
Seg seg seg NA 313-333
338-353
superfamily SSF52047 RNI-like 1.5e-39 16-340
Wolf-PSORT
Lj3g3v1393590.1	extr 8, chlo 2, cyto 2, plas 1, vacu 1, cyto_nucl 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1393590.1