Miyakogusa Predicted Gene

Lj3g3v1381530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SZP5_LOTJA 136 98.4 98.4 (tr|I3SZP5) Uncharacterized protein OS=Lotus japonicus PE=3 SV=1
TAIR_pep AT1G49400.1 103 78.0 91.5 | Symbols: emb1129 | Nucleic acid-binding, OB-fold-like protein | chr1:18283156-18283643 FORWARD LENGTH=116
Medicago Medtr6g005030.1 119 84.1 93.7 | 30S ribosomal S17-like protein | HC | chr6:579520-580699 | 20130731
Soybean Glyma07g19190.1 116 87.5 95.3  
LJGI gnl|LJGI|TC63060 416 94.9 94.9 homologue to UniRef100_A7QA47 Cluster: Chromosome undetermined scaffold_69, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_69, whole genome shotgun sequence - Vitis vinifera (Grape), partial (85%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1381530.1 length: 158 aa.
IPR000266 Ribosomal protein S17
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD001295 Q6YYA7_ORYSA_Q6YYA7; 3e-16 95-141
FPrintScan PR00973 RIBOSOMALS17 5.3e-08 90-113
122-132
132-139
HMMPanther PTHR10744 40S 2.6e-22 97-151
HMMPfam PF00366 Ribosomal_S17 8.7e-16 95-143
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 2.2e-20 95-150
superfamily SSF50249 Nucleic 2.8e-17 97-151
no_ID  
Seg seg seg NA 5-9
Wolf-PSORT
Lj3g3v1381530.1	nucl 12, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1381530.1